Data Cleaner for Anthropometric Measurements


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Documentation for package ‘growthcleanr’ version 3.0.0

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growthcleanr-package growthcleanr: a data cleaner for anthropometric measurements
CDCref_d CDC BMI reference data
child_z3_reference Child unit-error-range reference values
cleangrowth Clean growth measurements (main growthcleanr function)
cleangrowth_checkpoint Run cleangrowth() with automatic checkpointing (deprecated wrapper)
cleangrowth_checkpoint_combine Combine saved checkpoint files from a checkpointed cleangrowth() run
ewma Exponentially Weighted Moving Average (EWMA)
ext_bmiz Calculate extended BMI measures
fenton2025_ms_lookup_smoothed Approximated Fenton CSD Values (M, S_upper, S_lower)
fent_foraga Approximated Fenton Median Weights by Gestational Age
gc_cli_path Path to the growthcleanr command-line driver script
gc_partial_run Incremental (partial) growthcleanr run
gc_preload_refs Pre-load growthcleanr reference closures
gc_runtrial Trial run of growthcleanr on a sample of your data
growthcleanr growthcleanr: a data cleaner for anthropometric measurements
growthcleanr_app Run the growthcleanr Shiny application
growth_cdc_ext_infants CDC Growth Reference Table
growth_who_ext WHO Growth Reference Table
longwide Transform data in growthcleanr format into wide structure for BMI calculation
permissiveness_presets Return preset setting values for each permissiveness level
rc-reference-medians Recentering reference medians
read_anthro Function to calculate z-scores and csd-scores based on anthro tables.
recode_sex Recode binary sex variable for compatibility
run_gc_cli Run growthcleanr from the command line (CSV in, CSV out)
simple_bmi Compute BMI using standard formula
syngrowth syngrowth
tanner_ht_vel Tanner Growth Velocity Table
who_hc_maxvel WHO Maximum Head Circumference Velocity for (3sigma)
who_hc_vel_3sd WHO Head Circumference Velocity for (3sigma)
who_ht_maxvel WHO Maximum Height Velocity for (3sigma)
who_ht_vel_3sd WHO Height Velocity for (3sigma)