Mechanism Evidence Graph Data Model
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Documentation for package ‘mechgraph’ version 0.0.1
Help Pages
| as.igraph.mechgraph | Convert a mechgraph object to an igraph object |
| as_mechgraph | Build a mechgraph from an edge list |
| is_mechgraph | Create and inspect mechgraph objects |
| mg_add_edges | Modify mechgraph nodes and edges |
| mg_add_nodes | Modify mechgraph nodes and edges |
| mg_bind | Combine mechgraph objects |
| mg_biogrid_download | Build a mechgraph from BioGRID |
| mg_biogrid_file_url | Build a mechgraph from BioGRID |
| mg_biogrid_parse | Build a mechgraph from BioGRID |
| mg_biogrid_versions | Build a mechgraph from BioGRID |
| mg_combine | Combine mechgraph objects |
| mg_drop_edges | Modify mechgraph nodes and edges |
| mg_drop_nodes | Modify mechgraph nodes and edges |
| mg_edges | Access mechgraph tables and metadata |
| mg_empty | Create and inspect mechgraph objects |
| mg_filter_edges | Filter mechgraph objects |
| mg_filter_nodes | Filter mechgraph objects |
| mg_from_biogrid | Build a mechgraph from BioGRID |
| mg_from_edges | Build a mechgraph from an edge list |
| mg_from_string | Build a mechgraph from STRING |
| mg_graph | Create and inspect mechgraph objects |
| mg_induced_subgraph | Filter mechgraph objects |
| mg_metadata | Access mechgraph tables and metadata |
| mg_nodes | Access mechgraph tables and metadata |
| mg_qc | Summarize mechgraph quality-control metrics |
| mg_sources | Access mechgraph tables and metadata |
| mg_string_download | Build a mechgraph from STRING |
| mg_string_file_url | Build a mechgraph from STRING |
| mg_string_parse | Build a mechgraph from STRING |
| mg_string_species | Build a mechgraph from STRING |
| mg_string_versions | Build a mechgraph from STRING |
| mg_validate | Validate a mechgraph object |