Familia 2.0.0

• Added a Ploidy selector to the Find Parentage and Validate Pedigree tabs, passed through to ‘BIGpopA’ so pedigree validation and parentage assignment now support any ploidy. Even ploidy uses the full polysomic Mendelian test; odd ploidy (e.g. triploid) uses a homozygosity-based check. Default is 2 (diploid).
• Updated the in-app Instructions and Help panels to document the Ploidy option and to generalize genotype dosage coding to 0, 1, …, ploidy.
• Requires ‘BIGpopA’ (>= 2.0.0).

Familia 1.0.4

• Updated the funding attribution banner on the Home tab to read “University of Florida” instead of “Cornell University”, reflecting the correct institution.
• Added URL and BugReports fields to DESCRIPTION.

Familia 1.0.3

• Addressed CRAN reviewer feedback: removed the redundant “R” from the Title; wrapped software names (‘shiny’, ‘LEA’) in single quotes in the Title and Description; added method references to the Description (sNMF, the ‘LEA’ package, the breed-composition methods of Funkhouser et al. and Sandercock et al., and the ‘BIGpopA’ package) with DOIs or canonical URLs; and replaced the \dontrun{} example wrapper in run_app() with if(interactive()){}.

Familia 1.0.2

*Fixed test directory for CRAN submission

Familia 1.0.1

• Prepared app for CRAN submission.
• Replaced the tidyverse meta-package dependency with dplyr and tidyr.
• Declared ggplot2, curl, and httr in Imports and removed the unused viridis dependency.
• Removed the Remotes field now that BIGpopA is available on CRAN.

Familia 0.1.0

• Initial Golem framework