Package: soilFlux
Title: Physics-Informed Neural Networks for Soil Water Retention Curves
Version: 0.1.5
Authors@R: 
    person(
      "Hugo", "Rodrigues",
      email = "rodrigues.machado.hugo@gmail.com",
      role  = c("aut", "cre"),
      comment = c(ORCID = "0000-0002-8070-8126")
    )
Description: Implements a physics-informed one-dimensional convolutional
    neural network (CNN1D-PINN) for estimating the complete soil water
    retention curve (SWRC) as a continuous function of matric potential,
    from soil texture, organic carbon, bulk density, and depth.
    The network architecture ensures strict monotonic decrease of
    volumetric water content with increasing suction by construction,
    through cumulative integration of non-negative slope outputs
    (monotone integral architecture). Four physics-based residual
    constraints adapted from Norouzi et al. (2025) <doi:10.1029/2024WR038149>
    are embedded in the loss function: (S1) linearity at the dry end
    (pF in [5, 7.6]); (S2) non-negativity at pF = 6.2;
    (S3) non-positivity at pF = 7.6; and (S4) a near-zero derivative
    in the saturated plateau region (pF in [-2, -0.3]). Includes tools
    for data preparation, model training, dense prediction, performance
    metrics, texture classification, and publication-quality visualisation.
License: MIT + file LICENSE
Encoding: UTF-8
SystemRequirements: Python (>= 3.8), TensorFlow (>= 2.14), Keras (>=
        3.0)
LazyData: true
LazyDataCompression: xz
RoxygenNote: 7.3.3
Depends: R (>= 4.1.0)
Imports: dplyr (>= 1.1.0), tidyr (>= 1.3.0), ggplot2 (>= 3.4.0), purrr
        (>= 1.0.0), tibble (>= 3.2.0), stringr (>= 1.5.0), reticulate
        (>= 1.34.0), tensorflow (>= 2.14.0), rlang (>= 1.1.0)
Suggests: keras3 (>= 1.0.0), ggtern, readxl (>= 1.4.0), scales (>=
        1.2.0), knitr, rmarkdown, testthat (>= 3.0.0), withr
Config/testthat/edition: 3
VignetteBuilder: knitr
URL: https://github.com/HugoMachadoRodrigues/soilFlux,
        https://hugomachadorodrigues.github.io/soilFlux/
BugReports: https://github.com/HugoMachadoRodrigues/soilFlux/issues
NeedsCompilation: no
Packaged: 2026-03-21 21:09:59 UTC; rodrigues.h
Author: Hugo Rodrigues [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-8070-8126>)
Maintainer: Hugo Rodrigues <rodrigues.machado.hugo@gmail.com>
Repository: CRAN
Date/Publication: 2026-03-26 09:30:02 UTC
Built: R 4.6.0; ; 2026-04-07 13:34:22 UTC; unix
