# Phylogenetic Structural Equation Model

## Documentation for package ‘phylosem’ version 1.1.4

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

as_fitted_DAG | Convert phylosem to phylopath output
as_phylo4d | Convert phylosem to phylo4d
as_sem | Convert phylosem to sem output
average | Choose model
average.compare_phylosem | Choose model
best | Extract best fitted model
best.compare_phylosem | Extract best fitted model
choice | Choose model
choice.compare_phylosem | Choose model
coef.phylosem | Extract path coefficients
compare_phylosem | Compare phylogenetic structural equation models
list_parameters | List fixed and random effects
Mlifehist_ver1_0 | Fisheries natural mortality example
parse_path | Parse path
phylosem | Fit phylogenetic structural equation model
phylosem_control | Detailed control for phylosem structure
print.phylosem | Print parameter estimates and standard errors.
summary.phylosem | summarize phylosem
vcov.phylosem | Extract Variance-Covariance Matrix